class_from_obs_id

0th

Percentile

Retrieve classifications from observation IDs

Retrieve taxonomic classifications from observation (e.g. sequence) IDs using a specified database.

Keywords
internal
Usage
class_from_obs_id(obs_id, database = c("ncbi", "none"), batch_size = 100,
  ...)
Arguments
obs_id

(character) An unique observation (e.g. sequence) identifier for a particular database. Requires an internet connection.

database

(character of length 1) The name of the database that patterns given in parser will apply to. Valid databases include "ncbi", "itis", "eol", "col", "tropicos", "nbn", and "none". "none" will cause no database to be quired; use this if you want to not use the internet. NOTE: Only "ncbi" has been tested so far.

...

Not used

Value

list of data.frame

Aliases
  • class_from_obs_id
Documentation reproduced from package metacoder, version 0.1.3, License: GPL-2 | GPL-3

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