metacoder (version 0.1.3)

plot_alignment: Display sequence alignment

Description

Make a plot af a sequence alignment for an overview of alignment structure.

Usage

plot_alignment(alignment)

Arguments

alignment

(DNAbin) A matrix representing a sequence alignment.

Value

A ggplot object

References

ColorBrewer2 was used for the color palette

Examples

Run this code
# NOT RUN {
library(ape)
data(woodmouse)
plot_alignment(woodmouse)
# }
# NOT RUN {
# }

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