Parses a file in BIOM format from QIIME into a taxmap object. I have not tested if it works with other BIOM files.
parse_qiime_biom(file)
(character
of length 1) The file path to the input file.
A taxmap object
This function was inspired by the tutorial created by Geoffrey Zahn at http://geoffreyzahn.com/getting-your-otu-table-into-r/.
Other parsers: parse_greengenes
,
parse_mothur_tax_summary
,
parse_mothur_taxonomy
,
parse_newick
, parse_phyloseq
,
parse_phylo
, parse_rdp
,
parse_silva_fasta
,
parse_unite_general