ncbi_sequence

Downloads the sequences associated with GenBank accession ids.

internal

A set of tools for parsing, manipulating, and graphing data
classified by a hierarchy (e.g. a taxonomy).

Zachary Foster

metacoder

Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data

Niklaus Grunwald

Rob Gilmore

ncbi_sequence function

<dl><dt>ids</dt>
<dd>(<code>character</code>) One or more accession numbers to get sequences for</dd>
<dt>batch_size</dt>
<dd>(<code>numeric</code> of length 1) The number of sequences to request in each query.
To large of values might case failures and too small will increase time to completion.</dd></dl>

Arguments

Downloads sequences from ids — ncbi_sequence

<dl>

<dt>ids</dt>
<dd>(<code>character</code>) One or more accession numbers to get sequences for</dd>


<dt>batch_size</dt>
<dd>(<code>numeric</code> of length 1) The number of sequences to request in each query.
To large of values might case failures and too small will increase time to completion.</dd>

</dl>

ncbi_sequence: Downloads sequences from ids

Description

Usage

Value

Arguments