metagenomeSeq (version 1.10.0)

plotTimeSeries: Plot difference function for particular bacteria

Description

Plot difference function for particular bacteria

Usage

plotTimeSeries(res, C = 0, xlab = "Time", ylab = "Difference in abundance", main = "SS difference function prediction", ...)

Arguments

res

Output of fitTimeSeries function

C

Value for which difference function has to be larger or smaller than (default 0).

xlab

X-label.

ylab

Y-label.

main

Main label.

...

Extra plotting arguments.

Value

Plot of difference in abundance for significant features.

Details

Plot the difference in abundance for significant features.

See Also

fitTimeSeries

Examples

data(mouseData)
res = fitTimeSeries(obj=mouseData,feature="Actinobacteria",
   class="status",id="mouseID",time="relativeTime",lvl='class',B=10)
plotTimeSeries(res)