metahdep (version 1.30.0)

HGU.prep.list: HGU.prep.list

Description

An illustrative example of a list, where each element is a metaprep class object with data for a particular gene. It comes from the study data held within the HGU.DifExp.list object.

Usage

data(HGU.prep.list)

Format

This object is a list of metaprep objects.

Details

Each element of HGU.prep.list is a gene-specific object of class metaprep.

HGU.prep.list is an example of an object created by the metahdep.format() function; see the help file for the metahdep.format() function and the metahdep package vignette for details on its construction. HGU.prep.list is an example object used as an argument to the metahdep() function. The individual elements of this object can be extracted and passed as arguments to the more general meta-analysis functions, metahdep.HBLM(), metahdep.REMA(), and metahdep.FEMA().

References

Stevens J.R. and Nicholas G. (2009), metahdep: Meta-analysis of hierarchically dependent gene expression studies, Bioinformatics, 25(19):2619-2620.

See also the metahdep package vignette.

Examples

data(HGU.prep.list)

HGU.prep.list[[7]]
## etc...