- ...
The input matrices. May be an output generated by the function
lpcor
or a coerced list generated by the function as.lpcor
- type
The type of correlation if an obect generated by the function
lpcor
is used. 1 = Linear correlation matrices, or 2 = partial
correlation matrices.
- nrepet
The number of permutations. Default is 1000
- names
An optional vector of names of the same length of ...
.
- prob
The error probability for Mantel test.
- diag
Logical argument. If TRUE
, the Kernel density is shown in
the diagonal of plot.
- export
Logical argument. If TRUE
, then the plot is exported to
the current directory.
- main
The title of the plot, set to 'auto'.
- file.type
The format of the file if export = TRUE
. Set to
'pdf'
. Other possible values are *.tiff
using file.type = 'tiff'
.
- file.name
The name of the plot when exported. Set to NULL
,
i.e., automatically.
- width
The width of the plot, set to 8
.
- height
The height of the plot, set to 7
.
- resolution
The resolution of the plot if file.type = 'tiff'
is
used. Set to 300
(300 dpi).
- size.point
The size of the points in the plot. Set to 0.5
.
- shape.point
The shape of the point, set to 19
.
- alpha.point
The value for transparency of the points: 1 = full color.
- fill.point
The color to fill the points. Valid argument if points are
between 21 and 25.
- col.point
The color for the edge of the point, set to black
.
- minsize
The size of the letter that will represent the smallest
correlation coefficient.
- maxsize
The size of the letter that will represent the largest
correlation coefficient.
- signcol
The colour that indicate significant correlations (based on
the prob
value.), set to 'green'.
- alpha
The value for transparency of the color informed in
signcol
, when 1 = full color. Set to 0.15.
- diagcol
The color in the kernel distribution. Set to 'gray'.
- col.up.panel, col.lw.panel, col.dia.panel
The color for the opper, lower
and diagonal pannels. Set to 'gray', 'gray', and 'gray', respectively.
- pan.spacing
The space between the pannels. Set to 0.15.
- digits
The number of digits to show in the plot.