get.ucsc.dbl

either <code>"gene"</code> or <code>"exon"</code>.

type

one of <code>"ucsc"</code> or <code>"refseq"</code> 
    to use the UCSC or RefSeq annotation sources 
    respectively.

refdb

Directly downloads UCSC and RefSeq annotation files from UCSC servers 
    to be used with metaseqR. This functionality is used when the package 
    RMySQL is not available for some reason, e.g. Windows machines. It
    created an SQLite database where the same queries can be used.

Provides an interface to several normalization and
    statistical testing packages for RNA-Seq gene expression data.
    Additionally, it creates several diagnostic plots, performs
    meta-analysis by combinining the results of several statistical
    tests and reports the results in an interactive way.

get.ucsc.dbl: Download annotation from UCSC servers, according to organism and source

Description

Usage

Arguments

Value

Examples