hg19.exon.counts

This data set contains RNA-Seq exon read counts for 3
    chromosomes. The data are from an experiment studying the
    effect of a long non-coding RNA related to the ASCL2 gene
    in WNT signaling and intestinal cancer. It has two
    conditions (CON, DOX) and four samples (CON_BR1, CON_BR2,
    DOX_BR1, DOX_BR2). It also contains a predefined
    <code>sample.list</code> and <code>libsize.list</code> named
    <code>sample.list.hg18</code> and <code>libsize.list.hg18</code>.

datasets

Provides an interface to several normalization and
    statistical testing packages for RNA-Seq gene expression data.
    Additionally, it creates several diagnostic plots, performs
    meta-analysis by combinining the results of several statistical
    tests and reports the results in an interactive way.

Panagiotis Moulos

metaseqR

An R package for the analysis and result reporting
    of RNA-Seq data by combining multiple statistical
    algorithms.

hg19.exon.counts function

a <code>data.frame</code> with exon read counts and some embedded annotation, one row per exon.

hg19.exon.counts: Human RNA-Seq data with three conditions, three samples

Description

Arguments

format

source