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metaseqR (version 1.12.2)

meta.worker: Permutation tests helper

Description

This function performs the statistical test for each permutation. Internal use only.

Usage

meta.worker(x,co,sl,cnt,s,r,sa,ll,
        el,w)

Arguments

x
a virtual list with the random seed and the permutation index.
co
the counts matrix.
sl
the sample list.
cnt
the contrast name.
s
the statistical algorithms.
sa
the parameters for each statistical algorithm.
ll
a list with library sizes.
r
same as the replace argument in the sample function.
el
min, max or weight.
w
a numeric vector of weights for each statistical algorithm

Value

  • A matrix of p-values.

Examples

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