methylPipe (version 1.4.0)

GElist-class: Class "GElist"

Description

This class is used in the methylPipe library to collect a set of GEcollection objects

Objects from the Class

Objects can be created by calls of the form new("GElist", ...) or using the function GElist(Objlist,names), see below. GElist are a collection of GEcollection objects (see GElist-class).

Slots

Objlist:

Object of class "list" : a list where each item is a GEcollection object

names:

Object of class "character" : vector of the names of the objects

Methods

"[["

signature(x = "GElist"): subsets the GElist returning a specific GEcollection object

"[[<-"

signature(x = "GElist"): replaces the specific GEcollection object in the GElist

"["

signature(x = "GElist"): subsets the GElist returning another GElist

See Also

GElist-class

Examples

gecollect_file <- system.file('extdata', 'gec.H1.Rdata', package='methylPipe')
load(gecollect_file)
gec1 <- gec.H1[start(gec.H1) < 153924]
gec2 <- gec.H1[start(gec.H1) > 153924]
gel.set <- GElist(g1=gec1, g2=gec2)