reports

<code>reports</code> is a data set of supported MGI reports, meaning reports that
<code>{mgi.report.reader}</code> can currently read into R.
To browse all reports made available by MGI visit
<a href="https://www.informatics.jax.org/downloads/reports/">https://www.informatics.jax.org/downloads/reports/</a>.

datasets

Provides readers for easy and consistent importing of
Mouse Genome Informatics (MGI) report files:
<https://www.informatics.jax.org/downloads/reports/index.html>. These data
are provided by Baldarelli RM, Smith CL, Ringwald M, Richardson JE, Bult CJ,
Mouse Genome Informatics Group (2024) <doi:10.1093/genetics/iyae031>.

Ramiro Magno

mgi.report.reader

Read Mouse Genome Informatics Reports

David Shaw

Isabel Duarte

Ismail Gbadamosi

Ali Jawaid

Nencki Institute of Experimental Biology 

University of Algarve 

The Jackson Laboratory 

Pattern Institute 

reports function

A <a href="https://tibble.tidyverse.org/reference/tibble-package.html">tibble</a> of 4 variables:
<dl>
<dt><code>report_key</code></dt>
<dd>A string key used to uniquely refer to an MGI report, which is only meaningful within the context of the <code>{mgi.report.reader}</code>.</dd><dt><code>report_file</code></dt>
<dd>MGI report file name as hosted at <a href="/link/%20https%3A%2F%2Fwww.informatics.jax.org%2Fdownloads%2Freports%2F%20?package=mgi.report.reader&version=0.1.3" data-mini-rdoc="mgi.report.reader:: https://www.informatics.jax.org/downloads/reports/ "> https://www.informatics.jax.org/downloads/reports/ </a>.</dd><dt><code>report_type</code></dt>
<dd>MGI report type. The type is used internally to find the appropriate reader for parsing, and is only meaningful within the context of <code>{mgi.report.reader}</code>.</dd><dt><code>report_name</code></dt>
<dd>MGI report name. Report names are taken from <a href="https://www.informatics.jax.org/downloads/reports/index.html">https://www.informatics.jax.org/downloads/reports/index.html</a>.</dd>
</dl>

Format

<code>reports</code> is a data set of supported MGI reports, meaning reports that
<code>{mgi.report.reader}</code> can currently read into R.
To browse all reports made available by MGI visit
<a href='https://www.informatics.jax.org/downloads/reports/'>https://www.informatics.jax.org/downloads/reports/</a>.

Supported MGI reports — reports

A <a href='https://tibble.tidyverse.org/reference/tibble-package.html'>tibble</a> of 4 variables:
<dl>
<dt><code>report_key</code></dt>
<dd>A string key used to uniquely refer to an MGI report, which is only meaningful within the context of the <code>{mgi.report.reader}</code>.</dd>

<dt><code>report_file</code></dt>
<dd>MGI report file name as hosted at <a href=' https://www.informatics.jax.org/downloads/reports/ '> https://www.informatics.jax.org/downloads/reports/ </a>.</dd>

<dt><code>report_type</code></dt>
<dd>MGI report type. The type is used internally to find the appropriate reader for parsing, and is only meaningful within the context of <code>{mgi.report.reader}</code>.</dd>

<dt><code>report_name</code></dt>
<dd>MGI report name. Report names are taken from <a href='https://www.informatics.jax.org/downloads/reports/index.html'>https://www.informatics.jax.org/downloads/reports/index.html</a>.</dd>


</dl>

reports: Supported MGI reports

Description

Usage

Arguments

Format

Examples