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mhtboot (version 1.3.3)

Multiple Hypothesis Test Based on Distribution of p Values

Description

A framework for multiple hypothesis testing based on distribution of p values. It is well known that the p values come from different distribution for null and alternatives, in this package we provide functions to detect that change. We provide a method for using the change in distribution of p values as a way to detect the true signals in the data.

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Version

Install

install.packages('mhtboot')

Monthly Downloads

186

Version

1.3.3

License

GPL-3

Maintainer

Abhirup Mallik

Last Published

October 30th, 2016

Functions in mhtboot (1.3.3)

plotpboot

Quantile plots for p value distributions.
pboot.2sample

Generate bootstrap distribution of p values based on user given two sample tests.
mht.1sample

Multiple hypothesis testing based on p value distribution for one sample test
mhtboot

mhtboot: A package for multiple hypothesis testing using bootstrap distribution of p values.
pboot.1sample.s

Generate p value distributions and estimate of sample correlation matrix using bootstrap.
pboot.1sample

Generate Bootstrap Distribution of p values for one sample tests.
elbow

Finding corner of a vector of ordered transformed p values
plotchange

plotchange
datgen

datgen
hitplots

Plot area under p value cdf below a cutoff.
ptrans

Transformation of order statistics of the p value distributions
qelbow

Finding corner of a quantile of ordered transformed p values