waterUptakeRatio

Vector of strings which contains the
names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')

microbeNames

Array: stoichiom[gname,resName,pathName]

stoichiom

Resource type array: Rtype[gname,resName,pathName]

Rtype

Named vector. Number of paths for each microbial group

numPaths

Computes the mass ratio of water uptake to substrate uptake
(i.e. mass uptake of water divided by total mass uptake)

internal

Modelling interacting microbial populations - example applications
include human gut microbiota, rumen microbiota and phytoplankton. Solves a
system of ordinary differential equations to simulate microbial growth and
resource uptake over time. This version contains network visualisation functions.

waterUptakeRatio: Computes the mass ratio of water uptake to substrate uptake (i.e. mass uptake of water divided by total mass uptake)

Description

Usage

Arguments

Value