hsTargets: Human microRNAs and their target IDs
Description
A set of human microRNA names and their corresponding known targets
given as ensembl Transcript IDs.
Format
A data frame of microRNAs and their target ensembl IDs as recovered
from miRBase. Additional columns are also provided to give the
Chromosome as well as the start and end position of the microRNA
binding site, and the strand orientation (plus or minus).Details
Each mapping represents a different human microRNA, paired with one
viable target. Other information about where the microRNA binds is
also included. Some microRNAs have multiple targets and so some
microRNAs may be represented more than once.
References
miRBase: microRNA sequences, targets and gene nomenclature.
Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ.
NAR, 2006, 34, Database Issue, D140-D144The microRNA Registry.
Griffiths-Jones S.
NAR, 2004, 32, Database Issue, D109-D111