otu_table

Provides functions to enhance the available
statistical analysis procedures in R by providing simple functions to
analysis and visualize the 16S rRNA data.Here we present a tutorial
with minimum working examples to demonstrate usage and dependencies.

Kai Guo

microbial

Do 16s Data Analysis and Generate Figures

Pan Gao

otu_table function

<dl><dt>physeq</dt>
<dd>(Required). An integer matrix, otu_table-class, or phyloseq-class.</dd>
<dt>...</dt>
<dd>parameters for the otu_table function in phyloseq package</dd></dl>

Arguments

extract otu table — otu_table

<dl>

<dt>physeq</dt>
<dd>(Required). An integer matrix, otu_table-class, or phyloseq-class.</dd>


<dt>...</dt>
<dd>parameters for the otu_table function in phyloseq package</dd>

</dl>

otu_table: extract otu table

Description

Usage

Arguments