orfLength

A <code>tibble</code> with the nine columns of the GFF-format (see <code><a rd-options="" href="/link/findOrfs?package=microseq&version=2.1.5" data-mini-rdoc="microseq::findOrfs">findOrfs</a></code>).

orf.tbl

Logical, length in amino acids instead of bases.

Computing the lengths of all ORFs in an <code>orf.table</code>.

Basic functions for microbial sequence data analysis. The idea is to use generic R data structures as much as possible, making R data wrangling possible also for sequence data.

Lars Snipen

microseq

Basic Biological Sequence Handling

orfLength function

<dl><dt>orf.tbl</dt>
<dd>A <code>tibble</code> with the nine columns of the GFF-format (see <code>findOrfs</code>).</dd>
<dt>aa</dt>
<dd>Logical, length in amino acids instead of bases.</dd></dl>

Arguments

Lars Snipen and Kristian Hovde Liland.

Author

Length of ORF — orfLength

<dl>

<dt>orf.tbl</dt>
<dd>A <code>tibble</code> with the nine columns of the GFF-format (see <code>findOrfs</code>).</dd>


<dt>aa</dt>
<dd>Logical, length in amino acids instead of bases.</dd>

</dl>

orfLength: Length of ORF

Description

Usage

Value

Arguments

Author

Details

See Also

Examples