gdb.list_genomes

Returns a data frame describing every genome resolvable from the active
registry chain (see <code>gdb.build_genome</code> for the chain order).

A toolkit for analysis of genomic data. The 'misha' package
implements an efficient data structure for storing genomic data, and
provides a set of functions for data extraction, manipulation and
analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay
(2011) <doi:10.1038/ng.947>.

Aviezer Lifshitz

misha

Toolkit for Analysis of Genomic Data

Misha Hoichman

Eitan Yaffe

Amos Tanay

Weizmann Institute of Science 

gdb.list_genomes function

<dl><dt>registry</dt>
<dd>Optional path to an explicit registry YAML, overriding the
resolution chain.</dd></dl>

Arguments

List resolvable genome names — gdb.list_genomes

<dl>

<dt>registry</dt>
<dd>Optional path to an explicit registry YAML, overriding the
resolution chain.</dd>

</dl>

gdb.list_genomes: List resolvable genome names

Description

Usage

Value

Arguments

See Also

Examples