gsynth.save

Saves a trained Markov model in the cross-platform .gsm format, which
consists of a metadata YAML file and raw binary arrays for counts and CDFs.
The .gsm format can be stored as a directory (default) or a ZIP archive.

A toolkit for analysis of genomic data. The 'misha' package
implements an efficient data structure for storing genomic data, and
provides a set of functions for data extraction, manipulation and
analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay
(2011) <doi:10.1038/ng.947>.

Aviezer Lifshitz

misha

Toolkit for Analysis of Genomic Data

Misha Hoichman

Eitan Yaffe

Amos Tanay

Weizmann Institute of Science 

gsynth.save function

<dl><dt>model</dt>
<dd>A gsynth.model object from <code>gsynth.train</code></dd>
<dt>file</dt>
<dd>Path to save the model (directory or .zip file)</dd>
<dt>compress</dt>
<dd>Logical. If <code>TRUE</code>, save as a ZIP archive. If
<code>FALSE</code> (default), save as a directory.</dd></dl>

Arguments

Save a gsynth.model to disk in .gsm format — gsynth.save

<dl>

<dt>model</dt>
<dd>A gsynth.model object from <code>gsynth.train</code></dd>


<dt>file</dt>
<dd>Path to save the model (directory or .zip file)</dd>


<dt>compress</dt>
<dd>Logical. If <code>TRUE</code>, save as a ZIP archive. If
<code>FALSE</code> (default), save as a directory.</dd>

</dl>

gsynth.save: Save a gsynth.model to disk in .gsm format

Description

Usage

Value

Arguments

See Also