gseq.revcomp

Alias for <code>grevcomp</code>. Takes a DNA sequence string and returns its reverse complement.

A toolkit for analysis of genomic data. The 'misha' package
implements an efficient data structure for storing genomic data, and
provides a set of functions for data extraction, manipulation and
analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay
(2011) <doi:10.1038/ng.947>.

Aviezer Lifshitz

misha

Toolkit for Analysis of Genomic Data

Misha Hoichman

Eitan Yaffe

Amos Tanay

Weizmann Institute of Science 

gseq.revcomp function

<dl><dt>seq</dt>
<dd>A character vector containing DNA sequences (using A,C,G,T). Ignores other characters and NA values.</dd></dl>

Arguments

Get reverse complement of DNA sequence — gseq.revcomp

<dl>

<dt>seq</dt>
<dd>A character vector containing DNA sequences (using A,C,G,T). Ignores other characters and NA values.</dd>

</dl>

gseq.revcomp: Get reverse complement of DNA sequence

Description

Usage

Value

Arguments

See Also

Examples