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mixAK (version 1.0)
Mixture of methods including mixtures
Description
This package contains a mixture of statistical methods including the MCMC methods to analyze normal mixtures
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Install
install.packages('mixAK')
Monthly Downloads
856
Version
1.0
License
GPL (>= 2)
Maintainer
Arnošt Komárek
Last Published
June 15th, 2010
Functions in mixAK (1.0)
Search functions
GLMM_MCMCifit
Initial (RE)ML fits for the GLMM_MCMC function
MatMPpinv
Moore-Penrose pseudoinverse of a squared matrix
BLA
Best linear approximation with respect to the mean square error (theoretical linear regression).
GLMM_MCMCprior.b
Handle prior.eps argument of GLMM_MCMC function
MVN
Multivariate normal distribution
NMixPlugDA
Discriminant analysis based on plug-in estimates from the mixture model
GLMM_MCMCscale.b
Handle scale.b argument of GLMM_MCMC function
NMixEM
EM algorithm for a homoscedastic normal mixture
GLMM_MCMCprior.beta
Handle prior.beta argument of GLMM_MCMC function
GLMM_longitDA
Discriminant analysis for longitudinal profiles based on fitted GLMM's
NMixPredCondCDFMarg
Univariate conditional predictive cumulative distribution function
NMixPlugCondDensMarg
Univariate conditional densities: plug-in estimate
Dirichlet
Dirichlet distribution
GLMM_MCMCdata
Data manipulation for the GLMM_MCMC function
NMixPlugCondDensJoint2
Pairwise bivariate conditional densities: plug-in estimate
GLMM_MCMCprior.eps
Handle prior.eps argument of GLMM_MCMC function
NMixPredCondDensJoint2
Pairwise bivariate conditional predictive densities
Y2T
Transform fitted distribution of Y=trans(T) into distribution of T
Tandmob
Signal Tandmobiel data
NMixRelabelAlgorithm
Argument manipulation for the NMixRelabel functions
TandmobEmer
Signal Tandmobiel data - emergence times
NMixMCMC
MCMC estimation of (multivariate) normal mixtures with possibly censored data.
plot.NMixPredCDFMarg
Plot computed marginal predictive cumulative distribution functions
NMixMCMCinity
Initial values of censored observations for the NMixMCMC function
plot.NMixPredCondDensMarg
Plot computed univariate conditional predictive densities
Wishart
Wishart distribution
plot.NMixPlugDensJoint2
Plot computed marginal pairwise bivariate densities (plug-in estimate)
plot.NMixPredDensMarg
Plot computed marginal predictive densities
plot.NMixPredCondDensJoint2
Plot computed predictive pairwise bivariate conditional densities
NMixPredDensJoint2
Pairwise bivariate predictive density
NMixPseudoGOF
Pseudo goodness-of-fit test for a normal mixture model
PBCseq
Mayo Clinic Primary Biliary Cirrhosis, sequential data
GLMM_MCMC
MCMC estimation of generalized linear mixed model with mixtures in the distributions.
Enzyme
Enzymatic activity in the blood
NMixPredCondDensMarg
Univariate conditional predictive density
TMVN
Truncated multivariate normal distribution
NMixMCMCinitr
Initial component allocations for the NMixMCMC function
rSamplePair
Sample a pair (with replacement)
SP2Rect
Creation of a rectangular symmetric matrix from its lower triangle (symmetric packed format)
plot.NMixPredCondCDFMarg
Plot computed univariate conditional predictive cumulative distribution functions
rRotationMatrix
Random rotation matrix
autolayout
Automatic layout for several plots in one figure
cbplot
Plot a function together with its confidence/credible bands
generatePermutations
Generate all permutations of (1, ..., K)
NMixRelabel
Re-labeling the MCMC output of the mixture model
Faithful
Old Faithful Geyser Data
NMixMCMCdata
Data manipulation for the NMixMCMC function
NMixPlugDensJoint2
Pairwise bivariate densities: plug-in estimate
plot.NMixPlugCondDensJoint2
Plot computed pairwise bivariate conditional densities (plug-in estimate)
plot.NMixPredDensJoint2
Plot computed marginal pairwise bivariate predictive densities
MVNmixture
Mixture of (multivariate) normal distributions
NMixPredDensMarg
Marginal (univariate) predictive density
NMixPredDA
Discriminant analysis based on MCMC output from the mixture model
MatSqrt
Square root of a matrix
Galaxy
Velocities of distant galaxies
plot.NMixPlugDensMarg
Plot computed marginal predictive densities
NMixSummComp
Summary for the mixture components
NMixPlugDensMarg
Marginal (univariate) densities: plug-in estimate
NMixMCMCwrapper
Wrapper to the NMixMCMC main simulation.
tracePlots
Traceplots for selected parameters
Acidity
Acidity index of lakes in North-Central Wisconsin
TNorm
Truncated normal distribution
plot.NMixPlugCondDensMarg
Plot computed univariate conditional densities (plug-in estimate)
NMixChainsDerived
Create MCMC chains derived from previously sampled values
NMixPredCDFMarg
Marginal (univariate) predictive cumulative distribution function