mizer (version 0.4)

plotFMort: Plot total fishing mortality of each species by size

Description

After running a projection, plot the total fishing mortality of each species by size. The total fishing mortality is averaged over the specified time range (a single value for the time range can be used to plot a single time step).

Plot total fishing mortality using a MizerSim object.

Usage

plotFMort(object, ...)
# S4 method for MizerSim
plotFMort(object,
  time_range = max(as.numeric(dimnames(object@n)$time)), print_it = TRUE,
  ...)

Arguments

object

An object of class MizerSim.

...

Other arguments to pass to getFMort method

time_range

The time range (either a vector of values, a vector of min and max time, or a single value) to average the abundances over. Default is the final time step.

print_it

Display the plot, or just return the ggplot2 object

Value

A ggplot2 object

See Also

getFMort

Examples

# NOT RUN {
data(NS_species_params_gears)
data(inter)
params <- MizerParams(NS_species_params_gears, inter)
sim <- project(params, effort=1, t_max=20, t_save = 2)
plotFMort(sim)
plotFMort(sim, time_range = 10:20)
# }