mizer (version 1.0.1)

plotFeedingLevel: Plot the feeding level of species by size

Description

After running a projection, plot the feeding level of each species by size. The feeding level is averaged over the specified time range (a single value for the time range can be used).

Usage

plotFeedingLevel(sim, ...)
# S4 method for MizerSim
plotFeedingLevel(sim,
  species = as.character(sim@params@species_params$species),
  time_range = max(as.numeric(dimnames(sim@n)$time)), print_it = TRUE,
  ...)

Arguments

sim

An object of class '>MizerSim.

...

Other arguments to pass to getFeedingLevel method

species

Name or vector of names of the species to be plotted. By default all species are plotted.

time_range

The time range (either a vector of values, a vector of min and max time, or a single value) to average the abundances over. Default is the final time step.

print_it

Display the plot, or just return the ggplot2 object. Defaults to TRUE

Value

A ggplot2 object

See Also

getFeedingLevel

Examples

# NOT RUN {
data(NS_species_params_gears)
data(inter)
params <- MizerParams(NS_species_params_gears, inter)
sim <- project(params, effort=1, t_max=20, t_save = 2)
plotFeedingLevel(sim)
plotFeedingLevel(sim, time_range = 10:20)
# }