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mizer (version 2.0.0)

mizerResourceMort: Get predation mortality rate for resource needed to project standard mizer model

Description

Calculates the predation mortality rate \(\mu_p(w)\) on the resource spectrum by resource size (in units 1/year).

Usage

mizerResourceMort(params, n, n_pp, n_other, pred_rate, ...)

Arguments

params

A '>MizerParams object

n

A matrix of species abundances (species x size).

n_pp

A vector of the resource abundance by size

n_other

A list of abundances for other dynamical components of the ecosystem

pred_rate

A two dimensional array (predator species x prey size) with the predation rate, where the prey size runs over fish community plus resource spectrum.

...

Unused

Value

A vector of mortality rate by resource size.

Details

Used by the project function for running size based simulations.

See Also

Other mizer rate functions: mizerEGrowth(), mizerEReproAndGrowth(), mizerERepro(), mizerEncounter(), mizerFMortGear(), mizerFMort(), mizerFeedingLevel(), mizerMort(), mizerPredMort(), mizerPredRate(), mizerRDI(), mizerRates()