mlmm.gwas.AD

floweringDateAD

K.add

K.dom

<ul>
<li>Species: Helianthus annuus</li>
<li>Individuals: 125</li>
<li>Markers: 500</li>
</ul>

dataset

Pipeline for Genome-Wide Association Study using Multi-Locus Mixed Model from Segura V, Vilhj<c3><a1>lmsson BJ et al. (2012) <doi:10.1038/ng.2314>. The pipeline include detection of associated SNPs with MLMM, model selection by lowest eBIC and p-value threshold, estimation of the effects of the SNPs in the selected model and graphical functions.

Clement Mabire

mlmm.gwas

Pipeline for GWAS Using MLMM

mlmm.gwas.AD function

<ul>
<li>floweringDateAD: a named numeric of length 444.</li>
<li>Xa: a 110x500 numeric matrix</li>
<li>Xd: a 110x500 numeric matrix</li>
<li>K.add: a 110x110 numeric matrix</li>
<li>K.dom: a 110x110 numeric matrix</li>
</ul>

Format

Dataset for examples with the mlmm.gwas package, additive and additive+dominance models — mlmm.gwas.AD

Dataset for examples with the mlmm.gwas package, additive and additive+dominance models

mlmm.gwas.AD: Dataset for examples with the mlmm.gwas package, additive and additive+dominance models

Description

Usage

Arguments

Format

Details