coxmap: Mouse genetic map based on Cox et al. tools:::Rd_expr_doi("10.1534/genetics.109.105486"),
revised for mouse genome build 39.
Description
A data frame with rows being markers and six columns: marker name, chromosome,
sex-averaged cM position, female cM position, male cM position, and build 39 basepair position.
Arguments
Details
Genetic maps were re-estimated after reordering markers according to their position
in mouse genome build 39. See https://github.com/kbroman/CoxMapV3.
Markers were shifted so that 0 cM corresponds to 3 Mbp, using the chromosome- and
sex-specific recombination rate.
The maps are smoothed slightly to avoid intervals with 0 recombination.