Learn R Programming

mmnet (version 1.10.2)

preprocessKOMetabolites: Preprocessing of KO's (enzyme's) metabolites

Description

This function preprocess the KO information to delete the redundant metabolites

Usage

preprocessKOMetabolites(ko.info)

Arguments

ko.info
KO information, can be obtained by getKOPathwayInfo

Value

  • list, is composed of KO, substrates and products

Details

When we get the KO information first, there are reversible reaction, duplicate KOs and metabolites. This function merge all the KO information together and delete the redundant information.

See Also

getKOPathwayInfo, updateKEGGPathway