mmod (version 0.31)

Gst_Nei: Calculate Nei's Gst using estimators for Hs and Ht

Description

This function calculates Gst following Nei's method and using Nei and Chesser's estimators for Hs and Ht

Usage

Gst_Nei(x)

Arguments

x

genind object (from package adegenet)

Value

• per.locus estimates of Gst for each locus in the dataset

  per.locus estimates of Gst for across all loci

References

Nei M. (1973) Analysis of gene diversity in subdivided populations. PNAS: 3321-3323.

Nei M, Chesser RK. (1983). Estimation of fixation indices and gene diversities. Annals of Human Genetics. 47: 253-259.

See Also

Other diffstat: diff_stats, D_Jost, Gst_Hedrick, Phi_st_Meirmans

Other Nei: pairwise_Gst_Nei

Examples

data(nancycats)
Gst_Nei(nancycats)