momentuHierHMMData

Constructor of <code>momentuHierHMMData</code> objects

Extended tools for analyzing telemetry data using generalized hidden Markov models. Features of momentuHMM (pronounced ``momentum'') include data pre-processing and visualization, fitting HMMs to location and auxiliary biotelemetry or environmental data, biased and correlated random walk movement models, hierarchical HMMs, multiple imputation for incorporating location measurement error and missing data, user-specified design matrices and constraints for covariate modelling of parameters, random effects, decoding of the state process, visualization of fitted models, model checking and selection, and simulation. See McClintock and Michelot (2018) <doi:10.1111/2041-210X.12995>.

Brett T McClintock

momentuHMM

Maximum Likelihood Analysis of Animal Movement Behavior Using
Multivariate Hidden Markov Models

momentuHierHMMData function

<dl><dt>data</dt>
<dd>A dataframe containing: <code>ID</code> (the ID(s) of the observed animal(s)), <code>level</code> (the level of the hierarchy for each observation), and the data streams such as <code>step</code>
(the step lengths, if any), <code>angle</code> (the turning angles, if any), <code>x</code> (either easting or longitude, if any),
<code>y</code> (either norting or latitude, if any), and covariates (if any).</dd></dl>

Arguments

Constructor of momentuHierHMMData objects — momentuHierHMMData

<dl>

<dt>data</dt>
<dd>A dataframe containing: <code>ID</code> (the ID(s) of the observed animal(s)), <code>level</code> (the level of the hierarchy for each observation), and the data streams such as <code>step</code>
(the step lengths, if any), <code>angle</code> (the turning angles, if any), <code>x</code> (either easting or longitude, if any),
<code>y</code> (either norting or latitude, if any), and covariates (if any).</dd>

</dl>

momentuHierHMMData: Constructor of `momentuHierHMMData` objects

Description

Usage

Value

Arguments