calc_principal_graph

maxiter

<p>regularization parameter for k-means (the prefix of 'param'
is used to avoid name collision with gamma)</p>

L1.gamma

L1.sigma

verbose

<p>Function to automatically learn the structure of data by either using
L1-graph or the spanning-tree formulization</p>

Monocle 3 performs clustering, differential expression and
trajectory analysis for single-cell expression experiments. It orders
individual cells according to progress through a biological process,
without knowing ahead of time which genes define progress through that
process. Monocle 3 also performs differential expression analysis,
clustering, visualization, and other useful tasks on single-cell expression
data.  It is designed to work with RNA-Seq data, but could be used with
other types as well.

calc_principal_graph: Function to automatically learn the structure of data by either using L1-graph or the spanning-tree formulization

Description

Usage

Arguments

Value