choose_cells

The reduction method to plot while choosing cells.

reduction_method

Logical, return a list of cells instead of a subsetted
CDS object.

return_list

Choose cells interactively to subset a cds

Monocle 3 performs clustering, differential expression and
trajectory analysis for single-cell expression experiments. It orders
individual cells according to progress through a biological process,
without knowing ahead of time which genes define progress through that
process. Monocle 3 also performs differential expression analysis,
clustering, visualization, and other useful tasks on single-cell expression
data.  It is designed to work with RNA-Seq data, but could be used with
other types as well.

choose_cells: Choose cells interactively to subset a cds

Description

Usage

Arguments

Value