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monographaR (version 1.3.1)

Taxonomic Monographs Tools

Description

Contains functions intended to facilitate the production of plant taxonomic monographs. The package includes functions to convert tables into taxonomic descriptions, lists of collectors, examined specimens, identification keys (dichotomous and interactive), and can generate a monograph skeleton. Additionally, wrapper functions to batch the production of phenology histograms and distributional and diversity maps are also available.

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Version

Install

install.packages('monographaR')

Monthly Downloads

261

Version

1.3.1

License

GPL (>= 2)

Maintainer

Marcelo Reginato

Last Published

February 8th, 2024

Functions in monographaR (1.3.1)

monographaR_examples

Input data examples
phenoHist

Circular histograms of phenology
dichoKey

Dichotomous key
dataKey

Prepares a data.frame suitable for buildKey
interactiveKeyLabels

Text labels for interactiveKey
interactiveKey

Interactive key (shiny app)
dichoKey.app

Dichotomous key (shiny app)
examinedSpecimens

Generates an examined specimens list
codeMatrix

Code character matrix
collectorList

Generates a collector list
mapDiversity

Diversity heatmap
monographaR

Tools for taxonomic monographs.
tableToDescription

Generates species descriptions
mapTable

Generates a presence/absence matrix of species on grids or countries
mapPhenology

Phenology heatmap
buildMonograph

Build and export a monograph skeleton (draft)
codeGap

Code gap
mapBatch

Generates map in batch mode
keyCode

keyCode