# NOT RUN {
## Read in phylogeny and data from Thomas et al. (2009)
data(anolis.tree)
data(anolis.data)
## Convert data to class rateData with a rateMatrix object as input
anolis.rateMatrix <- as.rateMatrix(phy=anolis.tree, x="geo_ecomorph", data=anolis.data)
anolis.rateData <- as.rateData(y="Female_SVL", x="geo_ecomorph",
rateMatrix = anolis.rateMatrix, phy=NULL, data=anolis.data, log.y=TRUE)
## Convert data to class rateData with a phylo object as input
anolis.rateData <- as.rateData(y="Female_SVL", x="geo_ecomorph",
rateMatrix = NULL, phy=anolis.tree, data=anolis.data, log.y=TRUE)
# }
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