mppData_init


  
<p><code>mppData</code> object with raw genotypic and phenotypic data of a sample of the maize US nested association mapping (NAM) population. Different operations
  of quality control and data processing still need to be performed before
  the QTL detection analysis.</p>

datasets

Analysis of experimental multi-parent populations to detect regions
of the genome (called quantitative trait loci, QTLs) influencing
phenotypic traits measured in unique and multiple environments.
The population must be composed of crosses between a set of at
least three parents (e.g. factorial design, 'diallel', or nested
association mapping). The functions cover data processing,
QTL detection, and results visualization. The implemented methodology
is described in Garin, Wimmer, Mezmouk, Malosetti and van Eeuwijk (2017)
<doi:10.1007/s00122-017-2923-3>, in Garin, Malosetti
and van Eeuwijk (2020) <doi: 10.1007/s00122-020-03621-0>,
and in Garin, Diallo, Tekete, Thera, ..., and Rami (2024) <doi: 10.1093/genetics/iyae003>.

Vincent Garin

mppR

Multi-Parent Population QTL Analysis

Valentin Wimmer

Dietrich Borchardt

Fred van Eeuwijk

Marcos Malosetti

mppData_init function

Format

mppData object with raw data — mppData_init

<code>mppData</code> object with raw data

mppData_init: `mppData` object with raw data

Description

Usage

Arguments

Format

Details

See Also

Examples