Get THETA, OMEGA and SIGMA from a completed NONMEM run
nmxml(run = numeric(0), project = character(0), file = character(0),
theta = TRUE, omega = FALSE, sigma = FALSE, olabels = NULL,
slabels = NULL, oprefix = "", sprefix = "", tname = "THETA",
oname = "...", sname = "...", ...)run number
project directory
the complete path to the run.xml file
logical; if TRUE, the $THETA vector is returned
logical; if TRUE, the $OMEGA matrix is returned
logical; if TRUE, the $SIGMA matrix is returned
labels for $OMEGA
labels for $SIGMA
prefix for $OMEGA labels
prefix for $SIGMA labels
name for $THETA
name for $OMEGA
name for $SIGMA
passed along
a list with theta, omega and sigma elements, depending on what was requested
If run and project are supplied, the .xml file is assumed to be located in run.xml, in directory run off the project directory. If file is supplied, run and project arguments are ignored.