mritc (version 0.6.1)

plot.mritc: Plot Method for Class "mritc"

Description

Visualize MRI tissue classification results.

Usage

# S3 method for mritc
plot(x, method=c("RNifti","misc3d"), ...)

Value

NULL, invisibly

Arguments

x

an object of class "mritc"

method

the visualisation backend to use. The default, "RNifti", uses view; the alternative, "misc3d", uses the three-plane Tk-based viewer slices3d, which requires the tkrplot tcltk packages to be installed and useable.

...

any additional arguments for the relevant viewer.

Details

Allocate a voxel to the tissue type with the highest probability and then visualise the result.

See Also

view, slices3d

Examples

  T1 <- readMRI(system.file("extdata/t1.rawb.gz", package="mritc"),
                c(91,109,91), format="rawb.gz")
  mask <-readMRI(system.file("extdata/mask.rawb.gz", package="mritc"),
                 c(91,109,91), format="rawb.gz")
  tc.icm <- mritc(T1, mask, method="ICM")
  plot(tc.icm)