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msap (version 1.1.8)

repMet: Report methylation levels

Description

Prints a report of the relative number or different HPA-MSP band patterns in all groups

Usage

repMet(dataM,groups,nDec)

Arguments

dataM
A matrix of mixed band patterns, where each row is a different sample. Values of 11, 10, 1 and 0 represent patterns HPA+/MSP+,HPA+/MSP-,HPA-/MSP+,HPA-/MSP-, respectively.
groups
A list with the label for the group for every sample (row) in 'dataM'
nDec
number of digits of precision for floating point output.