pathway

This data includes metabolite set list for fasting and covid19 datasets in loadings package

 datasets

Computing metabolite set enrichment analysis (MSEA) (Yamamoto, H. et al. (2014) <doi:10.1186/1471-2105-15-51>), single sample enrichment analysis (SSEA) (Yamamoto, H. (2023) <doi:10.51094/jxiv.262>) and over-representation analysis (ORA) that accounts for undetected metabolites (Yamamoto, H. (2024) <doi:10.51094/jxiv.954>).

Hiroyuki Yamamoto

mseapca

Metabolite Set Enrichment Analysis for Loadings

pathway function

The list object pathway contains the following elements:
fasting : 	metabolite set list for fasting mouse dataset
covid19$proteomics : protein set list for covid19 dataset.

Arguments

Example of metabolite set list for fasting and covid19 datasets — pathway

The list object pathway contains the following elements:


fasting : 	metabolite set list for fasting mouse dataset


covid19$proteomics : protein set list for covid19 dataset.

pathway: Example of metabolite set list for fasting and covid19 datasets

Description

Usage

Arguments

References

Examples