msig (version 1.0)

msig_gene: Retrieve gene by Gene set Name

Description

Retrieve gene by Gene set Name

Usage

msig_gene(..., list = TRUE, info = TRUE)
# S3 method for character
msig_gene(..., list = TRUE, info = TRUE)
# S3 method for data.frame
msig_gene(..., list = TRUE, info = TRUE)

Arguments

...

one or more geneset names, which can be little or capital.

list

logical, default is FALSE, whether to show result by list.

info

logical, whether to show information about gene set.

Value

Print detail information about the geneset, number of genes and return all gene names.

Examples

# NOT RUN {
genes <- msig_gene('izadpanah_stem_cell_adipose_vs_bone_dn',
                   'REACTOME_DEGRADATION_OF_AXIN')
genes |>
    msig_view()
# }
# NOT RUN {

# }