msig (version 1.0)

msig_geneSymbol: Retrieve gene by Gene Symbol from MsigDB

Description

Retrieve gene by Gene Symbol from MsigDB

Usage

msig_geneSymbol(..., local = FALSE)
# S3 method for list
msig_geneSymbol(..., local = FALSE)
# S3 method for data.frame
msig_geneSymbol(..., local = FALSE)
# S3 method for character
msig_geneSymbol(..., local = FALSE)

Arguments

...

one or more geneset names, which can be little or capital.

local

logical, default is FALSE, whether to extract gene symbol from local database

Value

gene symbol

Examples

# NOT RUN {
genes <- msig_geneSymbol('izadpanah_stem_cell_adipose_vs_bone_dn')
genes <- msig_geneSymbol('izadpanah_stem_cell_adipose_vs_bone_dn',
                   'REACTOME_DEGRADATION_OF_AXIN')
# }