msigdbr_collections

<p>List the collections available in the msigdbr package</p>

Provides the 'Molecular Signatures Database' (MSigDB) gene
sets typically used with the 'Gene Set Enrichment Analysis' (GSEA)
software (Subramanian et al. 2005 <doi:10.1073/pnas.0506580102>,
Liberzon et al. 2015 <doi:10.1016/j.cels.2015.12.004>) in a standard R
data frame with key-value pairs. The package includes the human genes
as listed in MSigDB as well as the corresponding symbols and IDs for
frequently studied model organisms such as mouse, rat, pig, fly, and
yeast.

Igor Dolgalev

msigdbr_collections: List the collections available in the msigdbr package

Description

Usage

Arguments

Value

Examples