Bootstrap resampling for multi-state models
Developer documentation: misclassification model structure object
Criteria for comparing two multi-state models with nested state spaces
Multivariate hidden Markov models
Misclassification probability matrix
Developer documentation: model for covariates on misclassification probabilities
Developer documentation: hidden Markov model structure object
Expected first passage time
FEV1 measurements from lung transplant recipients
Calculate tables of hazard ratios for covariates on transition intensities
Hidden Markov model constructors
Calculate tables of odds ratios for covariates on
misclassification probabilities
Developer documentation: internal msm parameters object
Convert data for `msm' to data for `survival', `mstate' or `flexsurv' analysis
Fitted msm model objects
Extract msm model parameter estimates in compact format
Multi-state Markov and hidden Markov models in continuous time
Likelihood ratio test
Extract model log-likelihood
Measurement error distributions
Extract original data from msm objects.
Kaplan Meier estimates of incidence
Exponential distribution with piecewise-constant rate
Pearson-type goodness-of-fit test
Transition probability matrix
Parameters of phase-type models in mixture form
Plots of multi-state models
Developer documentation: transition model structure object
Estimated ratio of transition intensities
Print a fitted msm model object
Print a fitted msm model object
Developer documentation: model for covariates on transition intensities
Plot empirical and fitted survival curves
Psoriatic arthritis data
Plot of observed and expected prevalences
Transition probability matrix for processes with
piecewise-constant intensities
Probability of each state being next
Transition intensity matrix
Generic function to find quantiles of a distribution
Simulate multiple trajectories from a multi-state Markov model with arbitrary observation times
Explore the likelihood surface
Truncated Normal distribution
Mean sojourn times from a multi-state model
Convert data stored in msm object to old format
Passage probabilities
Score residuals
Tables of observed and expected prevalences
Simulate from a Markov model fitted using msm
updatepars.msm
Simulate one individual trajectory from a continuous-time Markov model
Calculate the probabilities of underlying states and the most
likely path through them
Table of transitions
Total length of stay, or expected number of visits
Summarise a fitted multi-state model
Transient and absorbing states
Calculate crude initial values for transition intensities
Coxian phase-type distribution with two phases
Bronchiolitis obliterans syndrome after lung transplants
Aortic aneurysm progression data
Matrix exponential
The delta method
Heart transplant monitoring data
Developer documentation: censoring model object
Extract model coefficients