boxWhisker

a (non-empty) matrix of data values

data

a (non-empty) vector of group IDs with length equal to the number of rows in data

groups

A color palette for plotting. The default is 'Paired.' See colorbrewer2.org for alternatives.

palette

A function to create a box and whisker plot by group ID.

Code to support a systems biology research program from inception through publication.  The methods focus on dimension reduction approaches to detect patterns in complex, multivariate experimental data and places an emphasis on informative visualizations.  The goal for this project is to create a package that will evolve over time, thereby remaining relevant and reflective of current methods and techniques.  As a result, we encourage suggested additions to the package, both methodological and graphical.

Samuel V Scarpino

multiDimBio

Multivariate Analysis and Visualization for Biological Data

boxWhisker function

<dl> <dt>data</dt>
<dd>a (non-empty) matrix of data values</dd> <dt>groups</dt>
<dd>a (non-empty) vector of group IDs with length equal to the number of rows in data</dd> <dt>palette</dt>
<dd>A color palette for plotting. The default is 'Paired.' See colorbrewer2.org for alternatives.</dd></dl>

Arguments

A function to create a box and whisker plot by group ID — boxWhisker

<dl>

 <dt>data</dt>
<dd>a (non-empty) matrix of data values</dd>

 <dt>groups</dt>
<dd>a (non-empty) vector of group IDs with length equal to the number of rows in data</dd>

 <dt>palette</dt>
<dd>A color palette for plotting. The default is 'Paired.' See colorbrewer2.org for alternatives.</dd>

</dl>

boxWhisker: A function to create a box and whisker plot by group ID

Description

Usage

Value

Arguments

Examples