MSAassess-class

S4 object that returns output from MSA model

MSAassess

Implementation of a next-generation, multi-stock age-structured fisheries assessment model.
'multiSA' is intended for use in mixed fisheries where stock composition can not be readily identified in
fishery data alone, e.g., from catch and age/length composition. Models can be fitted to genetic data,
e.g., stock composition of catches and close-kin pairs, with seasonal stock availability and movement.

Quang Huynh

multiSA

Multi-Stock Assessment

MSAassess-class function

<dl>
<dt><code>obj</code></dt>
<dd>RTMB object returned by <code>RTMB::MakeADFun()</code></dd></dl>
<dt><code>opt</code></dt>
<dd>List returned by <code><a href="/link/stats%3A%3Anlminb()?package=multiSA&version=0.1.0" data-mini-rdoc="multiSA::stats::nlminb()">stats::nlminb()</a></code></dd>
<dt><code>SD</code></dt>
<dd>List returned by <code>RTMB::sdreport()</code></dd>
<dt><code>report</code></dt>
<dd>List of model output at the parameter estimates, returned by <code>obj$report(obj$env$last.par.best)</code></dd>
<dt><code>Misc</code></dt>
<dd>List, miscellaneous items</dd>

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MSAassess S4 object — MSAassess-class

<dl>
<dt><code>obj</code></dt>
<dd>RTMB object returned by <code>RTMB::MakeADFun()</code></dd>


<dt><code>opt</code></dt>
<dd>List returned by <code><a href='https://rdrr.io/r/stats/nlminb.html'>stats::nlminb()</a></code></dd>


<dt><code>SD</code></dt>
<dd>List returned by <code>RTMB::sdreport()</code></dd>


<dt><code>report</code></dt>
<dd>List of model output at the parameter estimates, returned by <code>obj$report(obj$env$last.par.best)</code></dd>


<dt><code>Misc</code></dt>
<dd>List, miscellaneous items</dd>


</dl>

MSAassess-class: MSAassess S4 object

Description

Arguments

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