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multic (version 0.2.1)

Quantitative linkage analysis tools using the variance components approach

Description

Calculate the polygenic and major gene models for quantitative trait linkage analysis using variance components approach.

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Version

Install

install.packages('multic')

Monthly Downloads

33

Version

0.2.1

License

Copyright 2006 Mayo Foundation for Medical Education and Research This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. For other licensing arrangements, please contact Mariza de Andrade Mariza de Andrade, Ph.D. Division of Biostatistics Mayo Clinic 200 First St., SW Rochester, MN 55905 email: mandrade@mayo.edu

Maintainer

Eric Lunde

Last Published

February 15th, 2017

Functions in multic (0.2.1)

non.user.level.objects

This function is not intended for user-level use.
subsets

Choose Sets Of Size k From The n-Elements Of a Vector
plot.family.lods

Plot family contribution to peak LOD
expand.data

Create a "bootstrapped" version of a dataset to be used in multic.
t.rank

Empirical Normal Quantile transformation
print.multic

Use print() on a multic object
solar2mloci

Convert a directory of SOLAR-formatted ibd and/or mibd files into a multic-formatted mloci.out
addGE

Assess combinations of univariate multic objects
multic.object

a multic object
plot.multic

Plot a multic object
solar2multic

Convert SOLAR-formatted output into multic-formatted mloci.out and share.out
multic.control

Set control parameters for multic
phi2share

Convert a SOLAR-formatted phi2 file into a multic-formatted share.out file.
sw2mloci

Convert SimWalk IBD files into a single mloci.out.
multic

Create a multic object
expand.multic

Create "bootstrapped" versions of mloci.out and share.out for multic