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multic (version 0.4.2)

Quantitative Linkage Analysis Tools using the Variance Components Approach

Description

Calculate the polygenic and major gene models for quantitative trait linkage analysis using variance components approach. The 0.2.2 release includes bug fixes that allow 'multic' to run properly on 64-bit systems. The 0.3.0 release includes a fully implemented sw2mloci() function. As of 0.3.8, Splus version is no longer supported. Additional documentation and examples can be found in the inst directory.

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Version

Install

install.packages('multic')

Monthly Downloads

33

Version

0.4.2

License

GPL (>= 2) | file LICENSE

Maintainer

Pat Votruba

Last Published

August 21st, 2015

Functions in multic (0.4.2)

solar2multic

Convert SOLAR-formatted output into multic-formatted mloci.out and share.out
subsets

Choose Sets Of Size k From The n-Elements Of a Vector
addGE

Assess combinations of univariate multic objects
expand.multic

Create "bootstrapped" versions of mloci.out and share.out for multic
solar2mloci

Convert a directory of SOLAR-formatted ibd and/or mibd files into a multic-formatted mloci.out
non.user.level.objects

This function is not intended for user-level use.
tRank

Empirical Normal Quantile transformation
plot.multic

Plot a multic object
print.multic

Use print() on a multic object
phi2share

Convert a SOLAR-formatted phi2 file into a multic-formatted share.out file.
multic.control

Set control parameters for multic
expand.data

Create a "bootstrapped" version of a dataset to be used in multic.
plotFamilyLods

Plot family contribution to peak LOD
summary.multic

Use print() on a multic object
sw2mloci

Convert SimWalk IBD files into a single mloci.out.
multic

Create a multic object
multic.object

a multic object