exper_df

This is a small helepr function to concatenate the colData and assays within
SummarizedExperiment objects into a single data.frame. This is not necessary
for the essential multimedia workflow, it is only exported for potential
independent interest.

Multimodal mediation analysis is an emerging problem in microbiome data analysis. Multimedia make advanced mediation analysis techniques easy to use, ensuring that all statistical components are transparent and adaptable to specific problem contexts. The package provides a uniform interface to direct and indirect effect estimation, synthetic null hypothesis testing, bootstrap confidence interval construction, and sensitivity analysis. More details are available in Jiang et al. (2024) "multimedia: Multimodal Mediation Analysis of Microbiome Data" <doi:10.1101/2024.03.27.587024>.

Kris Sankaran

multimedia

Multimodal Mediation Analysis

Hanying Jiang

exper_df function

<dl><dt>exper</dt>
<dd>An object of class SummarizedExperiment.</dd></dl>

Arguments

Convert a Summarized Experiment to a data.frame — exper_df

<dl>

<dt>exper</dt>
<dd>An object of class SummarizedExperiment.</dd>

</dl>

exper_df: Convert a Summarized Experiment to a data.frame

Description

Usage

Value

Arguments

Examples