mutSignatures (version 1.2)

evaluateStability: Evaluate Results Stability

Description

Perform a final Stability check comparing the results from all iterations of the analysis

Usage

evaluateStability(wall, hall, params)

Arguments

wall

numeric matrix including the w results from all the iterations of the analysis

hall

numeric matrix including the h results from all the iterations of the analysis

params

object (list) including all the parameters required for running tha analysis

Value

list including all results from the stability checks. This includes the most likely signatures (centroids) and exposures. All information for plotting the silhoueette plot will also be returned

Details

The function evvaluates the results from all iterations by performin a silhouette check. A silhouette plot will also be plotted.

References

More info at: http://www.biotechworld.it/bioinf/2017/01/22/mutsignatures/

Examples

# NOT RUN {
tmp <- getTestRunArgs(5)
evaluateStability(wall = tmp$W, hall = tmp$H, params = tmp$params)
# }