Tasmania Dataset
Analysis of Deviance for Many Univariate Models Fitted to Multivariate Abundance Data
Fits a path of Generalised Linear Models with LASSO (or L1) penalties, and finds the best model by corss-validation.
Model Deviance
Use R^2 to find the variables that best explain a multivariate response.
ANOVA for Linear Model Fits for Multivariate Abundance Data
Testing for a environment-by-trait (fourth corner) interaction by analysis of deviance
Ant data, with species traits
Boxplots for multivariate abundance Data
Fits a Generalised Linear Models with a LASSO (or L1) penalty, given a value of the penalty parameter.
Fits a path of Generalised Linear Models with LASSO (or L1) penalties, and finds the model that minimises BIC.
Analysis of Deviance for Multivariate Generalized Linear Model
Fits for Abundance Data
workhose functions for fitting multivariate linear models
Construct Mean-Variance plots for Multivariate Abundance Data
Plot Diagnostics for a manyany or glm1path Object
Plot Diagnostics for a manylm or a manyglm Object
Plot Multivariate Abundance Data and Formulae
Draw a Mvabund Object split into groups.
Calculate the Log Likelihood
Fitting Many Univariate Models to Multivariate Abundance Data
Multivariate Abundance Data Objects
Model Formulae for Multivariate Abundance Data
Extend a Formula to all of it's Terms
Create a List of Univariate Formulas
Internal mvabund Objects
Statistical methods for analysing multivariate abundance data
Solberg Data
Spider data
Predictions from fourth corner model fits
Residuals for MANYGLM, MANYANY, GLM1PATH Fits
Fitting Generalized Linear Models for Multivariate Abundance Data
Fitting Linear Models for Multivariate Abundance Data
Predict Method for MANYGLM Fits
Tikus Island Dataset
Fits a fourth corner model for abundance as a function of environmental variables and species traits.
Remove the mvabund Class Attribute
Summarizing Multivariate Generalized Linear Model Fits for Abundance Data
Summarizing Linear Model Fits for Multivariate Abundance Data
Model Predictions for Multivariate Linear Models
Estimation of the ridge parameter
Calculate a shift for plotting overlapping points