mvp (version 1.0.1)

MVP.K.VanRaden: Calculate Kinship matrix by VanRaden method

Description

Calculate Kinship matrix by VanRaden method

Usage

MVP.K.VanRaden(M, weight=NULL, priority=c("speed", "memory"), memo=NULL, SUM=NULL, maxLine=1000)

Arguments

M

Genotype, m * n, m is marker size, n is population size

weight

vector, the weights for makers

priority

speed or memory

memo

a marker on output file name

SUM

the scaled parameter for Kinship

maxLine

when the priority is 'memory', users can change this parameter to limit the memory